The purpose of investigation is to create method for segmentation of aggregated structures of spherical particles (emulsion drops) in dispersive formations. Method is to be resistant to image noises and to allow processing aggregates of complex shape. Effect of the method is illustrated at model images as well as at the images of real emulsion fragments (type II emulsions – water in oil). Method may be used to design systems for emulsions (and other micro objects) measuring and analyzing.